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      • DNAnexus
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  1. Analysis

Popular Environments

The DNAstack Client Library can be used from within your bioinformatics workflows on almost any platform or engine. This section demonstrates the execution of a simple workflow on a variety of popular environments:

  • DNAnexus

  • Terra

  • Nextflow

  • Cromwell

  • CWLtool

Example Workflow

Our example workflow 02_download_collection_files demonstrates how to query and download 10 files from any collection in a Viral AI instance. You can find this and othe examples in the DNAstack Client Library worked examples Github repo.

The workflow is available in multiple formats:

  • Workflow Descriptor Language (WDL)

  • Common Workflow Language (CWL)

  • Nextflow

Proceed to the next section to learn how to run our WDL workflow on various platforms.

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Last updated 2 months ago

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