Monitor the Workflow

The Monitor page provides an up-to-date status on submitted runs. Click into a Workflow run to view a comprehensive overview of the run-time details, inputs, outputs and logs.

Viewing All Workflow Runs

1. Navigate to the Monitor tab to see a list of all submitted workflow runs.

2. The list displays:

   • Status (e.g., Succeeded, Failed, Aborted).

   • Submitted Date and Run Time.

   • Workflow Name, Version, Engine, and Run ID.

   • Associated Batch ID and Sample.

Viewing Workflow Details

1. Click on a specific run in the list to view its Overview. The tab shows the following:

   • Run ID.

   • Workflow Name and Version.

   • Start Time, End Time, and Elapsed Time.

Reviewing Workflow Inputs

1. Click on the Inputs tab.

2. View the JSON tree of inputs used for the workflow.

   • For Instrument-enabled workflows, all inputs are auto-generated, simplifying the process.

Reviewing Workflow Outputs

1. Click on the Outputs tab.

2. View the JSON tree of outputs generated by the workflow.

Summary

The Instruments feature in Workbench provides an efficient, user-friendly way to connect storage, manage samples, and execute workflows. By leveraging the UI, users can perform complex genomic analyses without needing advanced technical expertise.