Search across variant types

The Search tab finds every variant in the genes you name, across all variant types at once: small, structural, copy number, tandem repeat, paralog, and methylation. Use it when you have a candidate gene in mind and want to see everything the case holds for it, not just the priority findings.

The Search tab sits between Summary and the variant-type tabs. You can also reach it from Search all variants → on the Summary tab.

Running a search

1. Open the Search tab. Nothing loads until you search.

2. In Genes, type a gene symbol and press Enter. Add as many genes as you need.

   • To start from the case itself, click one of the suggested genes: genes the pipeline flagged in this case. These are a starting point, not a filter.

3. Review the results. A strip above the table shows how many matches each variant type returned (SNV, SV, CNV, TR, PARA, METH).

4. Switch between All variants (the default) and Priority only to narrow the list to priority findings.

5. Click a row to open the variant drawer. Use its previous/next controls to step through the search results.

The results table

Column	Description
Type	The variant type.
Gene	The gene that matched your search.
Automated Classification	The pipeline's own classification.
User Classification	A reviewer's classification, where one was made.
Relation	How the variant relates to the gene: in gene (annotated to it) or overlaps (within the gene or within 2 kb of it).
Coordinate	The variant's location.
Effect	A one-line summary, tailored to the variant type.

If a search matches more variants than can be listed at once, a warning asks you to narrow it. Search fewer genes to be sure nothing is missed. If one variant type couldn't be searched, the page says so; don't read its absence as a negative result.