Pipeline & caller versions

Each case is produced by a specific version of the long-read WGS workflow, which in turn pins specific versions of each variant caller and the reference data they use. That version set determines which variants are called and how they're annotated, so it is recorded on every case and every report.

Where to find the versions for a case

• In the sample drawer, available on every interpreter screen, under the sample's workflow history.

• On the submitted report.

Released version sheets

For each workflow release, the lab publishes a standardized Variant Caller Versions sheet (PDF) listing every caller and its pinned version. These are published alongside the release and linked here:

• [LINK: Tertiary Variant Caller Versions, v1.12.0 (PDF)]

• [LINK: Tertiary Variant Caller Versions, v1.11.0 (PDF)]

If you need to compare two cases that behave differently, check whether they were produced by different workflow versions first; that's the most common explanation.